//Created by libAntimony v2.4 model wolf_2001__environment(time_) // Variable initializations: time_ = ; end model wolf_2001__S1(S1, v8, v9, time_) // Rate Rules: S1' = v8 - v9; // Variable initializations: S1 = 1.892468811; v8 = ; v9 = ; time_ = ; end model wolf_2001__S(S1, S2, time_) // Assignment Rules: S2 := S - S1; // Variable initializations: S = 2; S1 = ; time_ = ; end model wolf_2001__sul(sul, v1, v2, time_) // Rate Rules: sul' = v1 - v2; // Variable initializations: sul = 0.012871557; v1 = ; v2 = ; time_ = ; end model wolf_2001__aps(aps, v2, v3, time_) // Rate Rules: aps' = v2 - v3; // Variable initializations: aps = 0.053366179; v2 = ; v3 = ; time_ = ; end model wolf_2001__pap(pap, v3, v4, time_) // Rate Rules: pap' = v3 - v4; // Variable initializations: pap = 0.082791522; v3 = ; v4 = ; time_ = ; end model wolf_2001__hyd(hyd, v4, v5, v17, time_) // Rate Rules: hyd' = v4 - (v5 + v17); // Variable initializations: hyd = 0.159317029; v4 = ; v5 = ; v17 = ; time_ = ; end model wolf_2001__cys(cys, v5, v6, time_) // Rate Rules: cys' = v5 - v6; // Variable initializations: cys = 0.805117739; v5 = ; v6 = ; time_ = ; end model wolf_2001__eth(eth, v13, v7, time_) // Rate Rules: eth' = v13 - v7; // Variable initializations: eth = 10.25246999; v13 = ; v7 = ; time_ = ; end model wolf_2001__aco(aco, v7, v8, v15, time_) // Rate Rules: aco' = v7 - (v8 + v15); // Variable initializations: aco = 1.139360412; v7 = ; v8 = ; v15 = ; time_ = ; end model wolf_2001__oxy(oxy, v10, v11A, v14, time_) // Rate Rules: oxy' = v10 - (v11A + v14); // Variable initializations: oxy = 6.146549084; v10 = ; v11A = ; v14 = ; time_ = ; end model wolf_2001__A3_c(A3_c, v2, v3, v12, v16, time_) // Rate Rules: A3_c' = v16 - (v2 + v3 + v12); // Variable initializations: A3_c = 1.570847601; v2 = ; v3 = ; v12 = ; v16 = ; time_ = ; end model wolf_2001__A3_m(A3_m, v11B, v16, time_) // Rate Rules: A3_m' = v11B - v16; // Variable initializations: A3_m = 1.835158493; v11B = ; v16 = ; time_ = ; end model wolf_2001__A_c(A2_c, A3_c, time_) // Assignment Rules: A2_c := A_c - A3_c; // Variable initializations: A_c = 2; A3_c = ; time_ = ; end model wolf_2001__A_m(A2_m, A3_m, time_) // Assignment Rules: A2_m := A_m - A3_m; // Variable initializations: A_m = 2; A3_m = ; time_ = ; end model wolf_2001__N2(N2, v4, v7, v9, v11A, time_) // Rate Rules: N2' = (2 * v7 + 4 * v9) - (3 * v4 + v11A); // Variable initializations: N2 = 1.933616149; v4 = ; v7 = ; v9 = ; v11A = ; time_ = ; end model wolf_2001__N(N1, N2, time_) // Assignment Rules: N1 := N - N2; // Variable initializations: N = 2; N2 = ; time_ = ; end model wolf_2001__oah(oah, v5, v15, v18, time_) // Rate Rules: oah' = v15 - (v5 + v18); // Variable initializations: oah = 5.571685096; v5 = ; v15 = ; v18 = ; time_ = ; end model wolf_2001__v1(cys, v1) // Assignment Rules: f1 := power(1 + power(cys / Kc, n), -(1)); v1 := v0 * f1; // Variable initializations: cys = ; v0 = 1.6; n = 4; Kc = 0.1; end model wolf_2001__v2(sul, A3_c, v2) // Assignment Rules: v2 := k2 * sul * A3_c; // Variable initializations: sul = ; A3_c = ; k2 = 0.2; end model wolf_2001__v3(aps, A3_c, v3) // Assignment Rules: v3 := k3 * aps * A3_c; // Variable initializations: aps = ; A3_c = ; k3 = 0.2; end model wolf_2001__v4(pap, N2, v4) // Assignment Rules: v4 := k4 * pap * N2; // Variable initializations: pap = ; N2 = ; k4 = 0.2; end model wolf_2001__v5(hyd, oah, v5) // Assignment Rules: v5 := k5 * hyd * oah; // Variable initializations: hyd = ; oah = ; k5 = 0.1; end model wolf_2001__v6(cys, v6) // Assignment Rules: v6 := k6 * cys; // Variable initializations: cys = ; k6 = 0.12; end model wolf_2001__v7(eth, N1, v7) // Assignment Rules: v7 := k7 * eth * N1; // Variable initializations: eth = ; N1 = ; k7 = 10; end model wolf_2001__v8(aco, S2, v8) // Assignment Rules: v8 := k8 * aco * S2; // Variable initializations: aco = ; S2 = ; k8 = 10; end model wolf_2001__v9(S1, N1, v9) // Assignment Rules: v9 := k9 * S1 * N1; // Variable initializations: S1 = ; N1 = ; k9 = 10; end model wolf_2001__v10(v10) // Variable initializations: v10 = 80; end model wolf_2001__v11A(oxy, hyd, N2, v11A) // Assignment Rules: f2 := power(1 + power(hyd / KH, m), -(1)); v11A := (k11 * N2 * oxy * f2) / (alpha * N2 + oxy); // Variable initializations: oxy = ; hyd = ; N2 = ; alpha = 0.1; m = 4; KH = 0.5; k11 = 10; end model wolf_2001__v11B(A2_m, A3_m, v11A, v11B) // Assignment Rules: v11B := (3 * v11A * A2_m) / (KA + A2_m); // Variable initializations: A2_m = ; A3_m = ; v11A = ; KA = 1; end model wolf_2001__v12(A3_c, v12) // Assignment Rules: v12 := k12 * A3_c; // Variable initializations: A3_c = ; k12 = 5; end model wolf_2001__v13(v13) // Variable initializations: v13 = 4; end model wolf_2001__v14(oxy, v14) // Assignment Rules: v14 := k14 * oxy; // Variable initializations: oxy = ; k14 = 10; end model wolf_2001__v15(aco, v15) // Assignment Rules: v15 := k15 * aco; // Variable initializations: aco = ; k15 = 5; end model wolf_2001__v16(A3_m, A2_c, v16) // Assignment Rules: v16 := k16 * A3_m * A2_c; // Variable initializations: A3_m = ; A2_c = ; k16 = 10; end model wolf_2001__v17(hyd, v17) // Assignment Rules: v17 := k17 * hyd; // Variable initializations: hyd = ; k17 = 0.02; end model wolf_2001__v18(oah, v18) // Assignment Rules: v18 := k18 * oah; // Variable initializations: oah = ; k18 = 1; end model *wolf_2001____main() // Sub-modules, and any changes to those submodules: environment: wolf_2001__environment(time_); S1: wolf_2001__S1(S10, v80, v90, time_); S: wolf_2001__S(S10, S2, time_); sul: wolf_2001__sul(sul0, v11, v20, time_); aps: wolf_2001__aps(aps0, v20, v30, time_); pap: wolf_2001__pap(pap0, v30, v40, time_); hyd: wolf_2001__hyd(hyd0, v40, v50, v170, time_); cys: wolf_2001__cys(cys0, v50, v60, time_); eth: wolf_2001__eth(eth0, v130, v70, time_); aco: wolf_2001__aco(aco0, v70, v80, v150, time_); oxy: wolf_2001__oxy(oxy0, v100, v11A0, v140, time_); A3_c: wolf_2001__A3_c(A3_c0, v20, v30, v120, v160, time_); A3_m: wolf_2001__A3_m(A3_m0, v11B0, v160, time_); A_c: wolf_2001__A_c(A2_c, A3_c0, time_); A_m: wolf_2001__A_m(A2_m, A3_m0, time_); N2: wolf_2001__N2(N20, v40, v70, v90, v11A0, time_); N: wolf_2001__N(N1, N20, time_); oah: wolf_2001__oah(oah0, v50, v150, v180, time_); v1: wolf_2001__v1(cys0, v11); v2: wolf_2001__v2(sul0, A3_c0, v20); v3: wolf_2001__v3(aps0, A3_c0, v30); v4: wolf_2001__v4(pap0, N20, v40); v5: wolf_2001__v5(hyd0, oah0, v50); v6: wolf_2001__v6(cys0, v60); v7: wolf_2001__v7(eth0, N1, v70); v8: wolf_2001__v8(aco0, S2, v80); v9: wolf_2001__v9(S10, N1, v90); v10: wolf_2001__v10(v100); v11A: wolf_2001__v11A(oxy0, hyd0, N20, v11A0); v11B: wolf_2001__v11B(A2_m, A3_m0, v11A0, v11B0); v12: wolf_2001__v12(A3_c0, v120); v13: wolf_2001__v13(v130); v14: wolf_2001__v14(oxy0, v140); v15: wolf_2001__v15(aco0, v150); v16: wolf_2001__v16(A3_m0, A2_c, v160); v17: wolf_2001__v17(hyd0, v170); v18: wolf_2001__v18(oah0, v180); end