//Created by libAntimony v2.4
model ueda_2001__environment(time_)

  // Variable initializations:
  time_ = ;
end

model ueda_2001__Per_m(Per_m, PT_n, CC_n, time_, D0, a, r)

  // Rate Rules:
  Per_m' = (C1 + S1 * ((power(CC_n / A1, a) + B1) / (1.0 + power(PT_n / R1, r) + power(CC_n / A1, a) + B1))) - (D1 * (Per_m / (L1 + Per_m)) + D0 * Per_m);

  // Variable initializations:
  Per_m = 0.5;
  B1 = 0.0;
  C1 = 0.0;
  S1 = 1.45;
  D1 = 0.94;
  L1 = 0.3;
  R1 = 1.02;
  A1 = 0.45;
  PT_n = ;
  CC_n = ;
  time_ = ;
  D0 = ;
  a = ;
  r = ;
end

model ueda_2001__Per_c(Per_c, V1, V2, Per_m, Tim_c, PT_c, time_, D0)

  // Rate Rules:
  Per_c' = (S2 * Per_m + V2 * PT_c) - (V1 * Per_c * Tim_c + D2 * Dbt_c * (Per_c / (L2 + Per_c)) + D0 * Per_c);

  // Variable initializations:
  Per_c = 0.6;
  S2 = 0.48;
  D2 = 0.44;
  L2 = 0.2;
  Dbt_c = 1.0;
  V1 = ;
  V2 = ;
  Per_m = ;
  Tim_c = ;
  PT_c = ;
  time_ = ;
  D0 = ;
end

model ueda_2001__Tim_m(Tim_m, PT_n, CC_n, time_, D0, a, r)

  // Rate Rules:
  Tim_m' = (C2 + S3 * ((power(CC_n / A2, a) + B2) / (1.0 + power(PT_n / R2, r) + power(CC_n / A2, a) + B2))) - (D3 * (Tim_m / (L3 + Tim_m)) + D0 * Tim_m);

  // Variable initializations:
  Tim_m = 0.7;
  B2 = 0.0;
  C2 = 0.0;
  S3 = 1.45;
  D3 = 0.94;
  L3 = 0.3;
  R2 = 1.02;
  A2 = 0.45;
  PT_n = ;
  CC_n = ;
  time_ = ;
  D0 = ;
  a = ;
  r = ;
end

model ueda_2001__Tim_c(Tim_c, V1, V2, Tim_m, Per_c, PT_c, time_, D0)

  // Rate Rules:
  Tim_c' = (S4 * Tim_m + V2 * PT_c) - (V1 * Per_c * Tim_c + D4 * (Tim_c / (L4 + Tim_c)) + D0 * Tim_c);

  // Variable initializations:
  Tim_c = 0.8;
  S4 = 0.48;
  D4 = 0.44;
  L4 = 0.2;
  V1 = ;
  V2 = ;
  Tim_m = ;
  Per_c = ;
  PT_c = ;
  time_ = ;
  D0 = ;
end

model ueda_2001__PT_c(PT_c, K1, K2, T1, T2, V1, V2, Tim_c, Per_c, PT_n, time_, D0)

  // Rate Rules:
  PT_c' = (V1 * Per_c * Tim_c + T2 * (PT_n / (K2 + PT_n))) - (V2 * PT_c + T1 * (PT_c / (K1 + PT_c)) + D5 * (PT_c / (L5 + PT_c)) + D0 * PT_c);

  // Variable initializations:
  PT_c = 0.9;
  D5 = 0.44;
  L5 = 0.2;
  K1 = ;
  K2 = ;
  T1 = ;
  T2 = ;
  V1 = ;
  V2 = ;
  Tim_c = ;
  Per_c = ;
  PT_n = ;
  time_ = ;
  D0 = ;
end

model ueda_2001__PT_n(PT_n, K1, K2, T1, T2, PT_c, time_, D0)

  // Rate Rules:
  PT_n' = T1 * (PT_c / (K1 + PT_c)) - (T2 * (PT_n / (K2 + PT_n)) + D6 * (PT_n / (L6 + PT_n)) + D0 * PT_n);

  // Variable initializations:
  PT_n = 1.0;
  D6 = 0.29;
  L6 = 0.2;
  K1 = ;
  K2 = ;
  T1 = ;
  T2 = ;
  PT_c = ;
  time_ = ;
  D0 = ;
end

model ueda_2001__Clk_m(Clk_m, CC_n, PT_n, time_, D0, a, r)

  // Rate Rules:
  Clk_m' = (C3 + S5 * ((power(PT_n / A3, a) + B3) / (1.0 + power(CC_n / R3, r) + power(PT_n / A3, a) + B3))) - (D7 * (Clk_m / (L7 + Clk_m)) + D0 * Clk_m);

  // Variable initializations:
  Clk_m = 0.1;
  B3 = 0.6;
  C3 = 0.0;
  S5 = 1.63;
  D7 = 0.54;
  L7 = 0.13;
  R3 = 0.89;
  A3 = 0.8;
  CC_n = ;
  PT_n = ;
  time_ = ;
  D0 = ;
  a = ;
  r = ;
end

model ueda_2001__Clk_c(Clk_c, V3, V4, Clk_m, Cyc_c, CC_c, time_, D0)

  // Rate Rules:
  Clk_c' = (S6 * Clk_m + V4 * CC_c) - (V3 * Clk_c * Cyc_c + D8 * (Clk_c / (L8 + Clk_c)) + D0 * Clk_c);

  // Variable initializations:
  Clk_c = 0.2;
  S6 = 0.47;
  D8 = 0.6;
  L8 = 0.2;
  V3 = ;
  V4 = ;
  Clk_m = ;
  Cyc_c = ;
  CC_c = ;
  time_ = ;
  D0 = ;
end

model ueda_2001__Cyc_c(Cyc_c)

  // Variable initializations:
  Cyc_c = 1.0;
end

model ueda_2001__CC_c(CC_c, K3, K4, T3, T4, V3, V4, Cyc_c, Clk_c, CC_n, time_, D0)

  // Rate Rules:
  CC_c' = (V3 * Clk_c * Cyc_c + T4 * (CC_n / (K4 + CC_n))) - (V4 * CC_c + T3 * (CC_c / (K3 + CC_c)) + D9 * (CC_c / (L9 + CC_c)) + D0 * CC_c);

  // Variable initializations:
  CC_c = 0.3;
  D9 = 0.6;
  L9 = 0.2;
  K3 = ;
  K4 = ;
  T3 = ;
  T4 = ;
  V3 = ;
  V4 = ;
  Cyc_c = ;
  Clk_c = ;
  CC_n = ;
  time_ = ;
  D0 = ;
end

model ueda_2001__CC_n(CC_n, K3, K4, T3, T4, CC_c, time_, D0)

  // Rate Rules:
  CC_n' = T3 * (CC_c / (K3 + CC_c)) - (T4 * (CC_n / (K4 + CC_n)) + D10 * (CC_n / (L10 + CC_n)) + D0 * CC_n);

  // Variable initializations:
  CC_n = 0.4;
  D10 = 0.3;
  L10 = 0.2;
  K3 = ;
  K4 = ;
  T3 = ;
  T4 = ;
  CC_c = ;
  time_ = ;
  D0 = ;
end

model ueda_2001__parameters(K1, K2, K3, K4, V1, V2, V3, V4, T1, T2, T3, T4, a, r, D0)

  // Variable initializations:
  K1 = 2.0;
  K2 = 2.0;
  K3 = 2.0;
  K4 = 2.0;
  V1 = 1.45;
  V2 = 1.45;
  V3 = 1.63;
  V4 = 1.63;
  T1 = 1.73;
  T2 = 0.72;
  T3 = 1.63;
  T4 = 0.52;
  a = 1.0;
  r = 4.0;
  D0 = 0.012;
end

model *ueda_2001____main()

  // Sub-modules, and any changes to those submodules:
  environment: ueda_2001__environment(time_);
  Per_m: ueda_2001__Per_m(Per_m0, PT_n0, CC_n0, time_, D0, a, r);
  Per_c: ueda_2001__Per_c(Per_c0, V1, V2, Per_m0, Tim_c0, PT_c0, time_, D0);
  Tim_m: ueda_2001__Tim_m(Tim_m0, PT_n0, CC_n0, time_, D0, a, r);
  Tim_c: ueda_2001__Tim_c(Tim_c0, V1, V2, Tim_m0, Per_c0, PT_c0, time_, D0);
  PT_c: ueda_2001__PT_c(PT_c0, K1, K2, T1, T2, V1, V2, Tim_c0, Per_c0, PT_n0, time_, D0);
  PT_n: ueda_2001__PT_n(PT_n0, K1, K2, T1, T2, PT_c0, time_, D0);
  Clk_m: ueda_2001__Clk_m(Clk_m0, CC_n0, PT_n0, time_, D0, a, r);
  Clk_c: ueda_2001__Clk_c(Clk_c0, V3, V4, Clk_m0, Cyc_c0, CC_c0, time_, D0);
  Cyc_c: ueda_2001__Cyc_c(Cyc_c0);
  CC_c: ueda_2001__CC_c(CC_c0, K3, K4, T3, T4, V3, V4, Cyc_c0, Clk_c0, CC_n0, time_, D0);
  CC_n: ueda_2001__CC_n(CC_n0, K3, K4, T3, T4, CC_c0, time_, D0);
  parameters: ueda_2001__parameters(K1, K2, K3, K4, V1, V2, V3, V4, T1, T2, T3, T4, a, r, D0);
end