//Created by libAntimony v2.4 model sriram_bernot_kepes_2007_version01__environment(time_) // Variable initializations: time_ = ; end model sriram_bernot_kepes_2007_version01__parameters(j_1, j_2, j_3, v_d1, v_d2, v_d3, k_d1, k_d2, k_d3, k_c1, k_c2, k_c3, k_m1, k_m2, k_m3, v_12, v_11, v_10, k_120, k_110, k_100, k_d4, k_d5, k_d6, n) // Variable initializations: j_1 = 0.9; j_2 = 0.5; j_3 = 0.6; v_d1 = 6; v_d2 = 1.052; v_d3 = 3; k_d1 = 0.8; k_d2 = 0.9; k_d3 = 0.8; k_c1 = 0.2; k_c2 = 0.22; k_c3 = 0.6; k_m1 = 5; k_m2 = 5; k_m3 = 5; v_12 = 15; v_11 = 15; v_10 = 15; k_120 = 10; k_110 = 10; k_100 = 10; k_d4 = 0.16; k_d5 = 0.16; k_d6 = 0.16; n = 2; end model sriram_bernot_kepes_2007_version01__C_1(C_1, v_12, k_120, k_d4, C_2, T_1, n, time_) // Rate Rules: C_1' = (v_12 * power(T_1, n)) / (power(k_120, n) + power(T_1, n) + power(C_2, n)) - k_d4 * C_1; // Variable initializations: C_1 = 0; v_12 = ; k_120 = ; k_d4 = ; C_2 = ; T_1 = ; n = ; time_ = ; end model sriram_bernot_kepes_2007_version01__C_2(C_2, v_11, k_110, k_d5, C_3, T_2, n, time_) // Rate Rules: C_2' = (v_11 * power(T_2, n)) / (power(k_110, n) + power(T_2, n) + power(C_3, n)) - k_d5 * C_2; // Variable initializations: C_2 = 0; v_11 = ; k_110 = ; k_d5 = ; C_3 = ; T_2 = ; n = ; time_ = ; end model sriram_bernot_kepes_2007_version01__C_3(C_3, v_10, k_100, k_d6, C_1, T_3, n, time_) // Rate Rules: C_3' = (v_10 * power(T_3, n)) / (power(k_100, n) + power(T_3, n) + power(C_1, n)) - k_d6 * C_3; // Variable initializations: C_3 = 0; v_10 = ; k_100 = ; k_d6 = ; C_1 = ; T_3 = ; n = ; time_ = ; end model sriram_bernot_kepes_2007_version01__T_1(T_1, v_d1, j_1, k_m1, k_d1, k_c1, T_3, C_1, n, time_) // Rate Rules: T_1' = (j_1 + (v_d1 * power(T_3, n)) / (power(k_m1, n) + power(T_3, n)) + k_c1 * C_1) - k_d1 * T_1; // Variable initializations: T_1 = 6; v_d1 = ; j_1 = ; k_m1 = ; k_d1 = ; k_c1 = ; T_3 = ; C_1 = ; n = ; time_ = ; end model sriram_bernot_kepes_2007_version01__T_2(T_2, v_d2, j_2, k_m2, k_d2, k_c2, T_1, C_2, n, time_) // Rate Rules: T_2' = (j_2 + (v_d2 * power(T_1, n)) / (power(k_m2, n) + power(T_1, n)) + k_c2 * C_2) - k_d2 * T_2; // Variable initializations: T_2 = 5; v_d2 = ; j_2 = ; k_m2 = ; k_d2 = ; k_c2 = ; T_1 = ; C_2 = ; n = ; time_ = ; end model sriram_bernot_kepes_2007_version01__T_3(T_3, v_d3, j_3, k_m3, k_d3, k_c3, T_2, C_3, n, time_) // Rate Rules: T_3' = (j_3 + (v_d3 * power(T_2, n)) / (power(k_m3, n) + power(T_2, n)) + k_c3 * C_3) - k_d3 * T_3; // Variable initializations: T_3 = 1; v_d3 = ; j_3 = ; k_m3 = ; k_d3 = ; k_c3 = ; T_2 = ; C_3 = ; n = ; time_ = ; end model *sriram_bernot_kepes_2007_version01____main() // Sub-modules, and any changes to those submodules: environment: sriram_bernot_kepes_2007_version01__environment(time_); parameters: sriram_bernot_kepes_2007_version01__parameters(j_1, j_2, j_3, v_d1, v_d2, v_d3, k_d1, k_d2, k_d3, k_c1, k_c2, k_c3, k_m1, k_m2, k_m3, v_12, v_11, v_10, k_120, k_110, k_100, k_d4, k_d5, k_d6, n); C_1: sriram_bernot_kepes_2007_version01__C_1(C_10, v_12, k_120, k_d4, C_20, T_10, n, time_); C_2: sriram_bernot_kepes_2007_version01__C_2(C_20, v_11, k_110, k_d5, C_30, T_20, n, time_); C_3: sriram_bernot_kepes_2007_version01__C_3(C_30, v_10, k_100, k_d6, C_10, T_30, n, time_); T_1: sriram_bernot_kepes_2007_version01__T_1(T_10, v_d1, j_1, k_m1, k_d1, k_c1, T_30, C_10, n, time_); T_2: sriram_bernot_kepes_2007_version01__T_2(T_20, v_d2, j_2, k_m2, k_d2, k_c2, T_10, C_20, n, time_); T_3: sriram_bernot_kepes_2007_version01__T_3(T_30, v_d3, j_3, k_m3, k_d3, k_c3, T_20, C_30, n, time_); end