//Created by libAntimony v2.4 model perelson_1993a__environment(time_) // Variable initializations: time_ = ; end model perelson_1993a__uninfected(time_, mu_T, k_1, T_1, T_2, V, T) // Rate Rules: T' = ((s - mu_T * T) + r * T * (1 - (T + T_1 + T_2) / T_max)) - k_1 * V * T; // Variable initializations: time_ = ; s = 10; r = 0.03; T_max = 1500; mu_T = 0.02; k_1 = ; T_1 = ; T_2 = ; V = ; T = 1000; end model perelson_1993a__latently_infected(time_, k_1, k_2, mu_T, V, T, T_1) // Rate Rules: T_1' = (k_1 * V * T - mu_T * T_1) - k_2 * T_1; // Variable initializations: time_ = ; k_1 = 2.4E-5; k_2 = ; mu_T = ; V = ; T = ; T_1 = 0; end model perelson_1993a__actively_infected(time_, k_2, mu_b, T_1, T_2) // Rate Rules: T_2' = k_2 * T_1 - mu_b * T_2; // Variable initializations: time_ = ; k_2 = 3E-3; mu_b = 0.24; T_1 = ; T_2 = 0; end model perelson_1993a__free_virus_particle(time_, mu_b, k_1, T, T_2, V) // Rate Rules: V' = (N * mu_b * T_2 - k_1 * V * T) - mu_V * V; // Variable initializations: time_ = ; mu_b = ; k_1 = ; mu_V = 2.4; N = 1400; T = ; T_2 = ; V = 1.0E-3; end model perelson_1993a__T_cell_population(T, T_1, T_2) // Assignment Rules: T_tot := T + T_1 + T_2; // Variable initializations: T = ; T_1 = ; T_2 = ; end model *perelson_1993a____main() // Sub-modules, and any changes to those submodules: environment: perelson_1993a__environment(time_); uninfected: perelson_1993a__uninfected(time_, mu_T, k_1, T_1, T_2, V, T); latently_infected: perelson_1993a__latently_infected(time_, k_1, k_2, mu_T, V, T, T_1); actively_infected: perelson_1993a__actively_infected(time_, k_2, mu_b, T_1, T_2); free_virus_particle: perelson_1993a__free_virus_particle(time_, mu_b, k_1, T, T_2, V); T_cell_population: perelson_1993a__T_cell_population(T, T_1, T_2); end