// Created by libAntimony v2.8.0 model *Sivakumar2011_EGFReceptorSignalingPathway() // Compartments and Species: compartment default, c2; species s21 in c2, s22 in c2, s25 in c2, s26 in c2, s27 in c2, s28 in c2; species s29 in c2, s30 in c2, s31 in c2, s33 in c2, s34 in c2, s23 in c2; species s24 in c2, s3 in default, s123 in c2, s124 in c2, s125 in c2, s126 in c2; species s127 in c2, s129 in c2, s142 in default, s144 in c2, s147 in c2; // Reactions: r8: s23 -> s24; kI_r8_s22/(kI_r8_s22 + s22)*(kI_r8_s29/(kI_r8_s29 + s29))*(kI_r8_s33/(kI_r8_s33 + s33))*(s124*((kcatp_r8_s124/kM_r8_s124_s23*s23 - kcatn_r8_s124/kM_r8_s124_s24*s24)/(1 + s23/kM_r8_s124_s23 + s24/kM_r8_s124_s24)) + s31*((kcatp_r8_s31/kM_r8_s31_s23*s23 - kcatn_r8_s31/kM_r8_s31_s24*s24)/(1 + s23/kM_r8_s31_s23 + s24/kM_r8_s31_s24))); r9: s25 -> s26; s24*((kcatp_r9/kM_r9_s25*s25 - kcatn_r9/kM_r9_s26*s26)/(1 + s25/kM_r9_s25 + s26/kM_r9_s26)); r11: s29 -> s30; s127*((kcatp_r11/kM_r11_s29*s29 - kcatn_r11/kM_r11_s30*s30)/(1 + s29/kM_r11_s29 + s30/kM_r11_s30)); r14: s27 -> s28; s26*((kcatp_r14/kM_r14_s27*s27 - kcatn_r14/kM_r14_s28*s28)/(1 + s27/kM_r14_s27 + s28/kM_r14_s28)); r15: s28 -> s34; kass_r15*s28 - kdiss_r15*s34; r17: 2s123 -> s129; s3*(kass_r17_s3*s123^2 - kdiss_r17_s3*s129); r6: s127 -> s127; s144*(kass_r6_s144*s127 - kdiss_r6_s144*s127); r7: s21 -> s22; s144*(kass_r7_s144*s21 - kdiss_r7_s144*s22); r4: s124 + s125 -> s124 + s126; s144*(kass_r4_s144*s124*s125 - kdiss_r4_s144*s124*s126); re11: s129 + s147 => s144; kI_re11_s142/(kI_re11_s142 + s142)*((Vp_re11*s129*s147)/(ki_re11_s129*kM_re11_s147 + kM_re11_s147*s129 + kM_re11_s129*s147 + s129*s147)); // Species initializations: s21 = 5/c2; s22 = 0; s25 = 5/c2; s26 = 0; s27 = 5/c2; s28 = 0; s29 = 5/c2; s30 = 0; s31 = 5/c2; s33 = 5/c2; s34 = 1/c2; s23 = 5/c2; s24 = 0; s3 = 5/default; s123 = 5/c2; s124 = 5/c2; s125 = 0.5/c2; s126 = 0; s127 = 2/c2; s129 = 0; s142 = 0.5/default; s144 = 0; s147 = 5/c2; // Compartment initializations: default = 1; c2 = 1; // Variable initializations: kcatp_r8_s124 = 0.511; kM_r8_s124_s23 = 0.47; kcatn_r8_s124 = 1.083; kM_r8_s124_s24 = 0.786; kcatp_r8_s31 = 0.727; kM_r8_s31_s23 = 0.614; kcatn_r8_s31 = 0.636; kM_r8_s31_s24 = 1.367; kI_r8_s22 = 0.583; kI_r8_s29 = 1.219; kI_r8_s33 = 0.293; kcatp_r9 = 2; kM_r9_s25 = 0.626; kcatn_r9 = 0.693; kM_r9_s26 = 0.463; kcatp_r11 = 0.787; kM_r11_s29 = 1.459; kcatn_r11 = 0.566; kM_r11_s30 = 1.021; kcatp_r14 = 0.558; kM_r14_s27 = 0.038; kcatn_r14 = 0.725; kM_r14_s28 = 1.65; kass_r15 = 2; kdiss_r15 = 0.074; kass_r17_s3 = 0.73; kdiss_r17_s3 = 1.13; kI_re11_s142 = 1; kass_r6_s144 = 1; kdiss_r6_s144 = 1; kass_r7_s144 = 1; kdiss_r7_s144 = 1; kass_r4_s144 = 1; kdiss_r4_s144 = 1; Vp_re11 = 1; kM_re11_s129 = 1; kM_re11_s147 = 1; ki_re11_s129 = 1; // Other declarations: const default, c2, kcatp_r8_s124, kM_r8_s124_s23, kcatn_r8_s124, kM_r8_s124_s24; const kcatp_r8_s31, kM_r8_s31_s23, kcatn_r8_s31, kM_r8_s31_s24, kI_r8_s22; const kI_r8_s29, kI_r8_s33, kcatp_r9, kM_r9_s25, kcatn_r9, kM_r9_s26, kcatp_r11; const kM_r11_s29, kcatn_r11, kM_r11_s30, kcatp_r14, kM_r14_s27, kcatn_r14; const kM_r14_s28, kass_r15, kdiss_r15, kass_r17_s3, kdiss_r17_s3, kI_re11_s142; const kass_r6_s144, kdiss_r6_s144, kass_r7_s144, kdiss_r7_s144, kass_r4_s144; const kdiss_r4_s144, Vp_re11, kM_re11_s129, kM_re11_s147, ki_re11_s129; // Display Names: c2 is "Cytosol"; s21 is "Akt"; s22 is "Akt"; s25 is "MEK1_minus_2"; s26 is "MEK1_minus_2"; s27 is "ERK1_minus_2"; s28 is "ERK1_minus_2"; s29 is "RKIP"; s30 is "RKIP"; s31 is "PP2A"; s33 is "14_minus_3_minus_3"; s34 is "Mitogenesis_br_Differentiation"; s23 is "Raf_minus_1"; s24 is "Raf_minus_1"; s3 is "EGF"; s123 is "EGFR"; s124 is "Ras"; s125 is "GDP"; s126 is "GTP"; s127 is "PKC"; s129 is "EGFR"; s142 is "erlotinib"; s144 is "Complex_br_(EGFR/../_br_GAP)"; s147 is "Complex(Grb2/../PLC)"; end