// Created by libAntimony v2.8.0 model *Kim2007_CellularMemory_SymmetricModel() // Compartments and Species: compartment compartment_; substanceOnly species R1 in compartment_, P1 in compartment_, P1_prime in compartment_; substanceOnly species R2 in compartment_, P2 in compartment_, P2_prime in compartment_; substanceOnly species P3_prime in compartment_, P4_prime in compartment_; // Assignment Rules: i1 := piecewise(1, time >= 50 && time <= 100, 0); i2 := piecewise(1, time >= 175 && time <= 225, 0); // Reactions: React1: => R1; i1; React2: R1 => ; d_R1*R1; React3: => P1; sP1R1*R1; React4: P1 => ; d_P1*P1; React5: => P1_prime; sP1_prime_P1*P1; React6: => P1_prime; s1/(1 + P2_prime^n); React7: => P1_prime; s3/(1 + P3_prime^n); React8: P1_prime => ; d_P1_prime*P1_prime; React9: => R2; i2; React10: R2 => ; d_R2*R2; React11: => P2; sP2R2*R2; React12: P2 => ; d_P2*P2; React13: => P2_prime; sP2_prime_P2*P2; React14: => P2_prime; s2/(1 + P1_prime^n); React15: P2_prime => ; d_P2_prime*P2_prime; React16: => P3_prime; sP3_prime_P2_prime*(P2_prime^n/(1 + P2_prime^n)); React17: P3_prime => ; d_P3_prime*P3_prime; React18: -> P2_prime; s3/(1 + P4_prime^n); React19: -> P4_prime; sP4_prime_P1_prime*(P1_prime^n/(1 + P1_prime^n)); React20: P4_prime -> ; d_P4_prime*P4_prime; // Species initializations: R1 = 0.01/compartment_; P1 = 0.1/compartment_; P1_prime = 0.1/compartment_; R2 = 0.1/compartment_; P2 = 1/compartment_; P2_prime = 1/compartment_; P3_prime = 0.1/compartment_; P4_prime = 0.1/compartment_; // Compartment initializations: compartment_ = 1; // Variable initializations: d_R1 = 0.23521; sP1R1 = 0.47305; d_P1 = 0.22367; sP1_prime_P1 = 0.28687; s1 = 0.4; n = 9; s3 = 0.2; d_P1_prime = 0.37048; d_R2 = 0.23521; sP2R2 = 0.47305; d_P2 = 0.22367; sP2_prime_P2 = 0.28687; s2 = 0.3; d_P2_prime = 0.37048; sP3_prime_P2_prime = 0.5; d_P3_prime = 0.37048; d_P4_prime = 0.37048; sP4_prime_P1_prime = 0.5; // Other declarations: var i1, i2; const compartment_, d_R1, sP1R1, d_P1, sP1_prime_P1, s1, n, s3, d_P1_prime; const d_R2, sP2R2, d_P2, sP2_prime_P2, s2, d_P2_prime, sP3_prime_P2_prime; const d_P3_prime, d_P4_prime, sP4_prime_P1_prime; // Unit definitions: unit substance = item; // Display Names: substance is "dimensionless"; end