// Created by libAntimony v2.8.0 model *Kholodenko1999___EGFR_signaling() // Compartments and Species: compartment compartment_; species EGF in compartment_, R in compartment_, Ra in compartment_, R2 in compartment_; species RP in compartment_, PLCg in compartment_, RPLCg in compartment_; species RPLCgP in compartment_, PLCgP in compartment_, Grb in compartment_; species RG in compartment_, SOS in compartment_, RGS in compartment_, GS in compartment_; species Shc in compartment_, RSh in compartment_, RShP in compartment_; species ShP in compartment_, RShG in compartment_, ShG in compartment_; species RShGS in compartment_, ShGS in compartment_, PLCgl in compartment_; // Reactions: v1: R + EGF -> Ra; (v1_k1f*R*EGF - v1_k1b*Ra)*compartment_; v2: 2Ra -> R2; (v2_k2f*Ra*Ra - v2_k2b*R2)*compartment_; v3: R2 -> RP; (v3_k3f*R2 - v3_k3b*RP)*compartment_; v4: RP => R2; (v4_V4*RP)/(v4_K4 + RP)*compartment_; v5: RP + PLCg -> RPLCg; (v5_k5f*RP*PLCg - v5_k5b*RPLCg)*compartment_; v6: RPLCg -> RPLCgP; (v6_k6f*RPLCg - v6_k6b*RPLCgP)*compartment_; v7: RPLCgP -> PLCgP + RP; (v7_k7f*RPLCgP - v7_k7b*RP*PLCgP)*compartment_; v8: PLCgP => PLCg; (v8_V8*PLCgP)/(v8_K8 + PLCgP)*compartment_; v9: Grb + RP -> RG; (v9_k9f*RP*Grb - v9_k9b*RG)*compartment_; v10: RG + SOS -> RGS; (v10_k10f*RG*SOS - v10_k10b*RGS)*compartment_; v11: RGS -> GS + RP; (v11_k11f*RGS - v11_k11b*RP*GS)*compartment_; v12: GS -> Grb + SOS; (v12_k12f*GS - v12_k12b*Grb*SOS)*compartment_; v13: Shc + RP -> RSh; (v13_k13f*RP*Shc - v13_k13b*RSh)*compartment_; v14: RSh -> RShP; (v14_k14f*RSh - v14_k14b*RShP)*compartment_; v15: RShP -> RP + ShP; (v15_k15f*RShP - v15_k15b*ShP*RP)*compartment_; v16: ShP => Shc; (v16_V16*ShP)/(v16_K16 + ShP)*compartment_; v17: RShP + Grb -> RShG; (v17_k17f*RShP*Grb - v17_k17b*RShG)*compartment_; v18: RShG -> ShG + RP; (v18_k18f*RShG - v18_k18b*RP*ShG)*compartment_; v19: SOS + RShG -> RShGS; (v19_k19f*RShG*SOS - v19_k19b*RShGS)*compartment_; v20: RShGS -> ShGS + RP; (v20_k20f*RShGS - v20_k20b*ShGS*RP)*compartment_; v21: Grb + ShP -> ShG; (v21_k21f*ShP*Grb - v21_k21b*ShG)*compartment_; v22: ShG + SOS -> ShGS; (v22_k22f*ShG*SOS - v22_k22b*ShGS)*compartment_; v23: ShGS -> GS + ShP; (v23_k23f*ShGS - v23_k23b*ShP*GS)*compartment_; v24: RShP + GS -> RShGS; (v24_k24f*RShP*GS - v24_k24b*RShGS)*compartment_; v25: PLCgP -> PLCgl; (v25_k25f*PLCgP - v25_k25b*PLCgl)*compartment_; // Species initializations: EGF = 680; R = 100; Ra = 0; R2 = 0; RP = 0; PLCg = 105; RPLCg = 0; RPLCgP = 0; PLCgP = 0; Grb = 85; RG = 0; SOS = 34; RGS = 0; GS = 0; Shc = 150; RSh = 0; RShP = 0; ShP = 0; RShG = 0; ShG = 0; RShGS = 0; ShGS = 0; PLCgl = 0; // Compartment initializations: compartment_ = 3e-012; // Variable initializations: v1_k1f = 0.003; v1_k1b = 0.06; v2_k2f = 0.01; v2_k2b = 0.1; v3_k3f = 1; v3_k3b = 0.01; v4_V4 = 450; v4_K4 = 50; v5_k5f = 0.06; v5_k5b = 0.2; v6_k6f = 1; v6_k6b = 0.05; v7_k7f = 0.3; v7_k7b = 0.006; v8_V8 = 1; v8_K8 = 100; v9_k9f = 0.003; v9_k9b = 0.05; v10_k10f = 0.01; v10_k10b = 0.06; v11_k11f = 0.03; v11_k11b = 0.0045; v12_k12f = 0.0015; v12_k12b = 0.0001; v13_k13f = 0.09; v13_k13b = 0.6; v14_k14f = 6; v14_k14b = 0.06; v15_k15f = 0.3; v15_k15b = 0.0009; v16_V16 = 1.7; v16_K16 = 340; v17_k17f = 0.003; v17_k17b = 0.1; v18_k18f = 0.3; v18_k18b = 0.0009; v19_k19f = 0.01; v19_k19b = 0.0214; v20_k20f = 0.12; v20_k20b = 0.00024; v21_k21f = 0.003; v21_k21b = 0.1; v22_k22f = 0.03; v22_k22b = 0.064; v23_k23f = 0.1; v23_k23b = 0.021; v24_k24f = 0.009; v24_k24b = 0.0429; v25_k25f = 1; v25_k25b = 0.03; // Other declarations: const compartment_; // Unit definitions: unit substance = 1e-9 mole; // Display Names: substance is "nanomole"; compartment_ is "cytoplasm"; EGF is "Epidermal_Growth_Factor"; R is "EGFR"; Ra is "EGF_EGFR"; R2 is "(EGF_EGFR)2"; RP is "(EGF_EGFR)2-P"; RPLCg is "(EGF_EGFR)2_PLCg"; RPLCgP is "(EGF_EGFR)2_PLCg-P"; PLCgP is "PLCg-P"; Grb is "Grb2"; RG is "(EGF_EGFR)2_Grb2"; RGS is "(EGF_EGFR)2_Grb2_SOS"; GS is "Grb2_SOS"; RSh is "(EGF_EGFR)2_Shc"; RShP is "(EGF_EGFR)_Shc-P"; ShP is "Shc-P"; RShG is "(EGF_EGFR)2_Shc_Grb2"; ShG is "Shc_Grb2"; RShGS is "(EGF_EGFR)2_Shc_Grb2_SOS"; ShGS is "Shc_Grb2_SOS"; PLCgl is "PLCgP-I"; v1 is "EGF_binds_to_EGFR"; v2 is "association_of_2_Ra_into_dimer"; v3 is "phosphorylation_of_R2"; v4 is "dephosphorylation_of_RP"; v5 is "binding_of_PLCg_to_RP"; v6 is "phosphorylation_of_PLCg"; v7 is "dissociation_of_RPLCgP"; v8 is "dephosphorylation_of_PLCgP"; v9 is "binding_of_Grb2_to_RP"; v10 is "binding_of_SOS_to_RG"; v11 is "dissociation_of_RGS"; v12 is "dissociation_of_GS"; v13 is "binding_of_Shc_to_RP"; v14 is "phosphorylation_of_RSh"; v15 is "dissociation_of_RShp"; v16 is "dephosphorylation_of_ShP"; v17 is "binding_of_Grb2_to_RShP"; v18 is "dissociation_of_RShG"; v19 is "binding_of_SOS_to_RShG"; v20 is "dissociation_of_RShGS"; v21 is "binding_of_Grb2_to_ShP"; v22 is "binding_of_SOS_to_ShG"; v23 is "dissociation_of_ShGS"; v24 is "association_of_RShP_and_GS"; v25 is "translocation_of_PLCgP"; end