// Created by libAntimony v2.8.0 model *Goldbeter_Calcium_Oscillation_based_on_CICR_AND_CA_Activated_degradation_of_IP3() // Compartments and Species: compartment extracellular, cytosol, intravesicular; species EC in extracellular, Z in cytosol, A in cytosol, Y in intravesicular; // Reactions: vin: EC => Z; cytosol*(vin_v0 + vin_v1*beta); v2: Z => Y; intravesicular*((v2_Vm2*Z^2)/(v2_K2^2 + Z^2)); v3: Y => Z; (cytosol*v3_Vm3*A^4*Y^2*Z^4)/((v3_Ka^4 + A^4)*(v3_Ky^2 + Y^2)*(v3_Kz^4 + Z^4)); v4: Y => Z; cytosol*v4_Kf*Y; v5: Z => EC; extracellular*v5_K*Z; v6: => A; cytosol*beta*v6_Vp; v7: A => ; (cytosol*v7_Vd*A^2*Z^v7_n)/((v7_Kp^2 + A^2)*(v7_Kd^v7_n + Z^v7_n)); v8: A => ; cytosol*v8_epsilon*A; // Species initializations: EC = 1000; Z = 0; A = 0.45; Y = 0.36; // Compartment initializations: extracellular = 1; cytosol = 1; intravesicular = 1; // Variable initializations: beta = 0.5; vin_v0 = 2; vin_v1 = 1; v2_Vm2 = 6.5; v2_K2 = 0.1; v3_Vm3 = 19.5; v3_Ka = 0.2; v3_Ky = 0.2; v3_Kz = 0.3; v4_Kf = 1; v5_K = 10; v6_Vp = 2.5; v7_Vd = 80; v7_Kp = 1; v7_Kd = 0.4; v7_n = 4; v8_epsilon = 0.1; // Other declarations: const extracellular, cytosol, intravesicular, beta; // Unit definitions: unit substance = 1e-6 mole; unit time_unit = 60 second; // Display Names: substance is "micromole (default)"; time_unit is "minute (default)"; v6 is "Agonist stimulated production of IP3"; v7 is "Ca dependent IP3 degradation"; v8 is "Ca independent IP3 degradation"; end