// Created by libAntimony v2.8.0 model *BIOMD0000000003() // Compartments and Species: compartment cell; species C in cell, M in cell, X in cell; // Assignment Rules: V1 := C*VM1*(C + Kc)^-1; V3 := M*VM3; // Reactions: reaction1: => C; cell*reaction1_vi; reaction2: C => ; C*cell*reaction2_kd; reaction3: C => ; C*cell*reaction3_vd*X*(C + reaction3_Kd)^-1; reaction4: => M; cell*(1 + -1*M)*V1*(reaction4_K1 + -1*M + 1)^-1; reaction5: M => ; cell*M*reaction5_V2*(reaction5_K2 + M)^-1; reaction6: => X; cell*V3*(1 + -1*X)*(reaction6_K3 + -1*X + 1)^-1; reaction7: X => ; cell*reaction7_V4*X*(reaction7_K4 + X)^-1; // Species initializations: C = 0.01; C has substance_per_volume; M = 0.01; M has substance_per_volume; X = 0.01; X has substance_per_volume; // Compartment initializations: cell = 1; cell has volume; // Variable initializations: VM1 = 3; Kc = 0.5; VM3 = 1; reaction1_vi = 0.025; reaction2_kd = 0.01; reaction3_vd = 0.25; reaction3_Kd = 0.02; reaction4_K1 = 0.005; reaction5_V2 = 1.5; reaction5_K2 = 0.005; reaction6_K3 = 0.005; reaction7_K4 = 0.005; reaction7_V4 = 0.5; // Other declarations: var V1, V3; const cell, VM1, Kc, VM3; // Unit definitions: unit volume = litre; unit substance = mole; unit substance_per_volume = mole / litre; // Display Names: C is "Cyclin"; M is "CDC-2 Kinase"; X is "Cyclin Protease"; reaction1 is "creation of cyclin"; reaction2 is "default degradation of cyclin"; reaction3 is "cdc2 kinase triggered degration of cyclin"; reaction4 is "activation of cdc2 kinase"; reaction5 is "deactivation of cdc2 kinase"; reaction6 is "activation of cyclin protease"; reaction7 is "deactivation of cyclin protease"; end